sendmail: fatal: parameter inet_interfaces: no local interface found for 10.33.128.172 INFO 19:38:50,193 HelpFormatter - ------------------------------------------------------------------ INFO 19:38:50,196 HelpFormatter - Program Name: org.broadinstitute.sv.apps.MergeInsertSizeHistograms INFO 19:38:50,200 HelpFormatter - Program Args: -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/JHP322.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/P7652074492.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/IPF_8170.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/IPF_1258.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/GEN171.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/Addisons_202566.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/GEN173.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/GEN191.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/AP1065202.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/1039-320.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/D6240000160.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/SEA001_Patient_I.a.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/GEN168.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/01231201.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/IPF_11263.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/04073200.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/P2114358525.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/5084-240.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/IPF_2518.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/P9773101378.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/P9364304888.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/IPF_1123.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/D6240000196.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/GEN181.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/02063201.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/SEA001_Patient_II.d.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/MG3037-121.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/MG3140-300.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/P3909952942.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/5017-141.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/P4411795615.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/P6684768246.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/P2397738928.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/JHP584.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/1066-200.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/05018201.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/MG3046-303.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/06016202.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/P7637672873.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/GEN177.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/GEN169.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/GEN158.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/06010205.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/JHP173.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/JHP278.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/D6240000140.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/P2594240466.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/3679895.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/P2519337933.recal.hist.bin -I /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd/GEN157.recal.hist.bin -O /gnet/is6/HumGenet/analysis/HumGenet_WGS/projects/structural/50g/preprocessing/metadata/isd.hist.bin INFO 19:38:50,203 HelpFormatter - Executing as wustera@rescomp1224.gene.com on Linux 2.6.32-504.3.3.el6.x86_64 amd64; Java HotSpot(TM) 64-Bit Server VM 1.7.0_15-b03. INFO 19:38:50,204 HelpFormatter - Date/Time: 2015/06/15 19:38:50 INFO 19:38:50,204 HelpFormatter - ------------------------------------------------------------------ INFO 19:38:50,204 HelpFormatter - ------------------------------------------------------------------ Exception in thread "main" java.lang.OutOfMemoryError: Java heap space at sun.reflect.GeneratedMethodAccessor7.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:601) at java.io.ObjectStreamClass.invokeReadObject(ObjectStreamClass.java:1004) at java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:1872) at java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:1777) at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1347) at java.io.ObjectInputStream.readObject(ObjectInputStream.java:369) at org.broadinstitute.sv.metadata.isize.InsertSizeHistogramFile$FileIterator.readHistogram(InsertSizeHistogramFile.java:140) at org.broadinstitute.sv.metadata.isize.InsertSizeHistogramFile$FileIterator.advance(InsertSizeHistogramFile.java:129) at org.broadinstitute.sv.metadata.isize.InsertSizeHistogramFile$FileIterator.(InsertSizeHistogramFile.java:95) at org.broadinstitute.sv.metadata.isize.InsertSizeHistogramFile.iterator(InsertSizeHistogramFile.java:43) at org.broadinstitute.sv.metadata.isize.InsertSizeHistogramFile.iterator(InsertSizeHistogramFile.java:27) at org.broadinstitute.sv.metadata.isize.InsertSizeHistogramMerger.mergeNonDisjoint(InsertSizeHistogramMerger.java:72) at org.broadinstitute.sv.metadata.isize.InsertSizeHistogramMerger.mergeHistograms(InsertSizeHistogramMerger.java:51) at org.broadinstitute.sv.apps.MergeInsertSizeHistograms.run(MergeInsertSizeHistograms.java:45) at org.broadinstitute.sv.commandline.CommandLineProgram.execute(CommandLineProgram.java:54) at org.broadinstitute.gatk.utils.commandline.CommandLineProgram.start(CommandLineProgram.java:248) at org.broadinstitute.gatk.utils.commandline.CommandLineProgram.start(CommandLineProgram.java:155) at org.broadinstitute.sv.commandline.CommandLineProgram.runAndReturnResult(CommandLineProgram.java:29) at org.broadinstitute.sv.commandline.CommandLineProgram.run(CommandLineProgram.java:25) at org.broadinstitute.sv.apps.MergeInsertSizeHistograms.main(MergeInsertSizeHistograms.java:39)